If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 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'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 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'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ), 'gf_id' => 'HOM05D000524', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000524' ), 'data_identifier' => 'HOM05D000524', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000524', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1038', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p00840' => 'bna', 'A04p01300' => 'bna', 'A07p16000' => 'bna', 'A07p25280' => 'bna', 'A08p29510' => 'bna', 'A08p36430' => 'bna', 'A09p58580' => 'bna', 'A10p04240' => 'bna', 'A10p31930' => 'bna', 'Aa31LG10G15150' => 'aar', 'Aa31LG1G19150' => 'aar', 'Aa31LG1G21130' => 'aar', 'Aa31LG1G27070' => 'aar', 'Aa31LG3G14130' => 'aar', 'Aa31LG3G14150' => 'aar', 'Aa31LG3G16050' => 'aar', 'Aa31LG7G15640' => 'aar', 'Aa31LG7G15650' => 'aar', 'Aa31LG7G4520' => 'aar', 'Aa31sc17G190' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.1047' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2770' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_368.2822' => 'aag', 'Actinidia07332' => 'ach', 'Actinidia11719' => 'ach', 'Actinidia11720' => 'ach', 'Actinidia12697' => 'ach', 'Actinidia13222' => 'ach', 'Actinidia15436' => 'ach', 'Actinidia21938' => 'ach', 'Actinidia22330' => 'ach', 'Actinidia23589' => 'ach', 'Actinidia26697' => 'ach', 'Actinidia29757' => 'ach', 'Actinidia31251' => 'ach', 'Actinidia31252' => 'ach', 'Actinidia32442' => 'ach', 'Actinidia33453' => 'ach', 'Actinidia33454' => 'ach', 'Actinidia37939' => 'ach', 'Actinidia38860' => 'ach', 'Ah.00g000310' => 'amhyb', 'Ah.01g004750' => 'amhyb', 'Ah.01g008500' => 'amhyb', 'Ah.01g022900' => 'amhyb', 'Ah.05g175480' => 'amhyb', 'Ah.09g224320' => 'amhyb', 'Ah.16g104630' => 'amhyb', 'AL1G15340' => 'aly', 'AL1G32890' => 'aly', 'AL4G10120' => 'aly', 'AL5G43260' => 'aly', 'AL6G13840' => 'aly', 'AL6G21730' => 'aly', 'Aqoxy1G01210' => 'aox', 'Aqoxy6G02283' => 'aox', 'Aqoxy6G02654' => 'aox', 'Aqoxy6G02655' => 'aox', 'Aqoxy7G00523' => 'aox', 'Aqoxy7G03619' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14P56I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.1W5XG7' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.68WCMC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.B5LLG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.C9JQ4Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D8290S' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EC1RTU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F25TPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F6U1X1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I40MZ1' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KYN5N8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.N8TJ15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T3YMMD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TFIC2J' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VW6V95' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W7YV9U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.X1IMZB' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XNK7YC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Z84XTW' => 'arhy', 'AT1G05500' => 'ath', 'AT1G20080' => 'ath', 'AT2G20990' => 'ath', 'AT2G21010' => 'ath', 'AT2G21040' => 'ath', 'AT3G60950' => 'ath', 'AT3G61030' => 'ath', 'AT3G61050' => 'ath', 'AT5G04220' => 'ath', 'ATR0048G037' => 'atr', 'ATR0661G484' => 'atr', 'ATR0712G035' => 'atr', 'ATR0767G072' => 'atr', 'Atru.chr12.799' => 'acertr', 'Atru.chr13.261' => 'acertr', 'Atru.chr13.262' => 'acertr', 'Atru.chr5.3307' => 'acertr', 'Atru.chr5.357' => 'acertr', 'Atru.chr7.1967' => 'acertr', 'Atru.chr7.2464' => 'acertr', 'Atru.chr8.1855' => 'acertr', 'AUR62004254' => 'cqu', 'AUR62010052' => 'cqu', 'AUR62011197' => 'cqu', 'AUR62012421' => 'cqu', 'AUR62013043' => 'cqu', 'AUR62013290' => 'cqu', 'AUR62023997' => 'cqu', 'AUR62023999' => 'cqu', 'AUR62031545' => 'cqu', 'AUR62031784' => 'cqu', 'AUR62031786' => 'cqu', 'AUR62040555' => 'cqu', 'AUR62041479' => 'cqu', 'AUR62042744' => 'cqu', 'BcaB02g06844' => 'bca', 'BcaB02g06850' => 'bca', 'BcaB02g07392' => 'bca', 'BcaB03g12882' => 'bca', 'BcaB03g13443' => 'bca', 'BcaB03g14338' => 'bca', 'BcaB03g14409' => 'bca', 'BcaB03g14412' => 'bca', 'BcaB08g34957' => 'bca', 'BcaC02g10201' => 'bca', 'BcaC03g13350' => 'bca', 'BcaC03g13351' => 'bca', 'BcaC05g24377' => 'bca', 'BcaC06g32125' => 'bca', 'BcaC07g36823' => 'bca', 'BcaC07g39018' => 'bca', 'BcaC07g41178' => 'bca', 'BcaC08g45096' => 'bca', 'BcaNung01912' => 'bca', 'BcaNung03337' => 'bca', 'BolC2t06444H' => 'bol', 'BolC4t24712H' => 'bol', 'BolC5t29163H' => 'bol', 'BolC6t37876H' => 'bol', 'BolC7t42118H' => 'bol', 'BolC7t42870H' => 'bol', 'BolC8t46989H' => 'bol', 'BolC8t49629H' => 'bol', 'BolC8t51750H' => 'bol', 'BolC9t60004H' => 'bol', 'BraA02t05067Z' => 'bra', 'BraA04t15849Z' => 'bra', 'BraA07t29329Z' => 'bra', 'BraA07t30170Z' => 'bra', 'BraA08t34888Z' => 'bra', 'BraA08t35546Z' => 'bra', 'BraA09t41245Z' => 'bra', 'BraA10t42691Z' => 'bra', 'BraA10t45237Z' => 'bra', 'C02p04860' => 'bna', 'C04p31650' => 'bna', 'C05p03860' => 'bna', 'C05p37890' => 'bna', 'C06p27040' => 'bna', 'C07p16240' => 'bna', 'C07p23370' => 'bna', 'C08p01920' => 'bna', 'C08p19910' => 'bna', 'C08p41870' => 'bna', 'C09p72640' => 'bna', 'CAN.G14.33' => 'can', 'CAN.G1561.14' => 'can', 'CAN.G1925.2' => 'can', 'CAN.G363.22' => 'can', 'CAN.G551.76' => 'can', 'CAN.G588.69' => 'can', 'CAN.G669.4' => 'can', 'CAN.G910.2' => 'can', 'CAN.G969.2' => 'can', 'CANSAT11G1591' => 'cansat', 'CANSAT25G1597' => 'cansat', 'CANSAT25G1985' => 'cansat', 'CANSAT25G3009' => 'cansat', 'CANSAT56G0399' => 'cansat', 'CANSAT56G1328' => 'cansat', 'CANSAT56G2309' => 'cansat', 'CANSAT56G3011' => 'cansat', 'CANSAT56G3366' => 'cansat', 'CARHR004980' => 'chi', 'CARHR020560' => 'chi', 'CARHR057160' => 'chi', 'CARHR104270' => 'chi', 'CARHR111870' => 'chi', 'CARHR114580' => 'chi', 'CARHR171360' => 'chi', 'CARHR202200' => 'chi', 'CARHR209050' => 'chi', 'CARHR221140' => 'chi', 'Carub.0001s0482' => 'cru', 'Carub.0001s1961' => 'cru', 'Carub.0004s0006' => 'cru', 'Carub.0005s2770' => 'cru', 'Carub.0006s0318' => 'cru', 'Carub.0006s0960' => 'cru', 'Ca_07840_v3' => 'car', 'Ca_10559_v3' => 'car', 'Ca_13436_v3' => 'car', 'Ca_15752_v3' => 'car', 'Ca_19063_v3' => 'car', 'Ca_21659_v3' => 'car', 'Ca_23820_v3' => 'car', 'CBR_g20378' => 'cbr', 'CBR_g22435' => 'cbr', 'CBR_g39896' => 'cbr', 'CBR_g39897' => 'cbr', 'CBR_g40378' => 'cbr', 'Cc02_g11240' => 'ccan', 'Cc02_g16250' => 'ccan', 'Cc02_g36370' => 'ccan', 'Cc06_g03970' => 'ccan', 'Cc06_g07860' => 'ccan', 'Cc08_g00430' => 'ccan', 'Cc10_g01460' => 'ccan', 'CDE02G1493' => 'cde', 'CDE02G3962' => 'cde', 'CDE04G2257' => 'cde', 'CDE04G3181' => 'cde', 'CDE05G0159' => 'cde', 'CDE05G0746' => 'cde', 'CDE09G0576' => 'cde', 'CDE12G0501' => 'cde', 'Cfa001658' => 'cfa', 'Cfa001832' => 'cfa', 'Cfa002295' => 'cfa', 'Cfa013124' => 'cfa', 'Cfa023144' => 'cfa', 'Cfa025744' => 'cfa', 'Cfa026752' => 'cfa', 'Ciclev10000806m.g' => 'ccl', 'Ciclev10007855m.g' => 'ccl', 'Ciclev10010358m.g' => 'ccl', 'Ciclev10013634m.g' => 'ccl', 'Ciclev10019763m.g' => 'ccl', 'Ciclev10028159m.g' => 'ccl', 'Ciclev10031152m.g' => 'ccl', 'CiPaw.01G043400' => 'cil', 'CiPaw.01G259600' => 'cil', 'CiPaw.01G271400' => 'cil', 'CiPaw.02G165300' => 'cil', 'CiPaw.03G249900' => 'cil', 'CiPaw.04G176300' => 'cil', 'CiPaw.05G081200' => 'cil', 'CiPaw.06G122800' => 'cil', 'CiPaw.07G147500' => 'cil', 'CiPaw.07G225100' => 'cil', 'CiPaw.08G067300' => 'cil', 'CiPaw.09G174700' => 'cil', 'CiPaw.14G013100' => 'cil', 'CiPaw.16G071200' => 'cil', 'ClCG02G004170' => 'cla', 'ClCG02G011870' => 'cla', 'ClCG05G016730' => 'cla', 'ClCG05G021090' => 'cla', 'ClCG06G000270' => 'cla', 'ClCG08G007590' => 'cla', 'ClCG08G014200' => 'cla', 'ClCG11G003370' => 'cla', 'COL.COLO4_12588' => 'col', 'COL.COLO4_15562' => 'col', 'COL.COLO4_17323' => 'col', 'COL.COLO4_18890' => 'col', 'COL.COLO4_26125' => 'col', 'COL.COLO4_26996' => 'col', 'COL.COLO4_28411' => 'col', 'Cpa.g.c25278.2' => 'cpa', 'Cpa.g.sc18.154' => 'cpa', 'Cpa.g.sc217.23' => 'cpa', 'Cpa.g.sc26.308' => 'cpa', 'Cpa.g.sc37.147' => 'cpa', 'Cpa.g.sc46.58' => 'cpa', 'Cre01.g044600' => 'cre', 'Cre01.g044650' => 'cre', 'Cre12.g559450' => 'cre', 'Cre13.g585700' => 'cre', 'Cre16.g685573' => 'cre', 'CsaV3_2G003220' => 'csa', 'CsaV3_2G016040' => 'csa', 'CsaV3_2G029640' => 'csa', 'CsaV3_3G046240' => 'csa', 'CsaV3_5G036200' => 'csa', 'CsaV3_6G006060' => 'csa', 'CsaV3_6G036540' => 'csa', 'CsaV3_7G000940' => 'csa', 'CSS0001660' => 'camsi', 'CSS0001668' => 'camsi', 'CSS0003499' => 'camsi', 'CSS0008508' => 'camsi', 'CSS0008752' => 'camsi', 'CSS0011129' => 'camsi', 'CSS0014389' => 'camsi', 'CSS0016146' => 'camsi', 'CSS0017313' => 'camsi', 'CSS0018022' => 'camsi', 'CSS0018595' => 'camsi', 'CSS0020535' => 'camsi', 'CSS0022301' => 'camsi', 'CSS0023422' => 'camsi', 'CSS0024448' => 'camsi', 'CSS0024593' => 'camsi', 'CSS0025265' => 'camsi', 'CSS0027894' => 'camsi', 'CSS0029644' => 'camsi', 'CSS0029981' => 'camsi', 'CSS0030177' => 'camsi', 'CSS0031331' => 'camsi', 'CSS0037880' => 'camsi', 'CSS0038543' => 'camsi', 'CSS0041187' => 'camsi', 'CSS0041471' => 'camsi', 'CSS0044601' => 'camsi', 'CSS0046136' => 'camsi', 'CSS0047122' => 'camsi', 'CSS0047190' => 'camsi', 'DCAR_000304' => 'dca', 'DCAR_003067' => 'dca', 'DCAR_003099' => 'dca', 'DCAR_003165' => 'dca', 'DCAR_006884' => 'dca', 'DCAR_009330' => 'dca', 'DCAR_009331' => 'dca', 'DCAR_009493' => 'dca', 'DCAR_013880' => 'dca', 'DCAR_016729' => 'dca', 'DCAR_017801' => 'dca', 'DCAR_019098' => 'dca', 'DCAR_024505' => 'dca', 'Dinv05005' => 'din', 'Dinv14099' => 'din', 'Dinv18202' => 'din', 'Dinv31311' => 'din', 'Dinv32399' => 'din', 'Dinv36425' => 'din', 'Dinv36465' => 'din', 'Dinv37293' => 'din', 'Dinv39535' => 'din', 'Dinv41461' => 'din', 'Dinv41948' => 'din', 'Duzib041G0310' => 'dzi', 'Duzib052G0637' => 'dzi', 'Duzib093G0688' => 'dzi', 'Duzib106G0423' => 'dzi', 'Duzib114G0128' => 'dzi', 'Duzib132G0746' => 'dzi', 'Duzib133G0787' => 'dzi', 'Duzib138G0869' => 'dzi', 'Duzib150G0236' => 'dzi', 'Duzib168G0616' => 'dzi', 'Duzib168G1897' => 'dzi', 'Duzib268G0215' => 'dzi', 'ECA232G1536' => 'eca', 'ECA233G0196' => 'eca', 'ECA233G1080' => 'eca', 'ECA233G5594' => 'eca', 'ECA234G0201' => 'eca', 'ECA234G0858' => 'eca', 'ECA236G2594' => 'eca', 'ECA240G0665' => 'eca', 'ECA240G1059' => 'eca', 'ECA240G1176' => 'eca', 'ECA246G0003' => 'eca', 'ECA246G0668' => 'eca', 'EL10Ac1g00919' => 'bvu', 'EL10Ac1g02167' => 'bvu', 'EL10Ac2g04189' => 'bvu', 'EL10Ac8g18753' => 'bvu', 'EL10Ac9g21027' => 'bvu', 'EL10Ac9g21392' => 'bvu', 'Eucgr.C02757' => 'egr', 'Eucgr.D02433' => 'egr', 'Eucgr.E01350' => 'egr', 'Eucgr.E03521' => 'egr', 'Eucgr.G02846' => 'egr', 'Eucgr.H00962' => 'egr', 'Eucgr.I01409' => 'egr', 'Eucgr.K01245' => 'egr', 'FAN01G0600' => 'fan', 'FAN01G1690' => 'fan', 'FAN02G2623' => 'fan', 'FAN03G1734' => 'fan', 'FAN03G2633' => 'fan', 'FAN05G0137' => 'fan', 'FAN06G1673' => 'fan', 'FAN06G3228' => 'fan', 'FAN06G3558' => 'fan', 'FAN10G0183' => 'fan', 'FAN10G0825' => 'fan', 'FAN10G3006' => 'fan', 'FAN10G3008' => 'fan', 'FAN14G2646' => 'fan', 'FAN15G2898' => 'fan', 'FAN15G3521' => 'fan', 'FAN19G1398' => 'fan', 'FAN19G3226' => 'fan', 'FAN20G0497' => 'fan', 'FAN20G0588' => 'fan', 'FAN20G1749' => 'fan', 'FAN23G0934' => 'fan', 'FAN23G1222' => 'fan', 'FAN24G1333' => 'fan', 'FAN24G2460' => 'fan', 'FAN26G1814' => 'fan', 'FAN26G3088' => 'fan', 'FAN27G2540' => 'fan', 'FAN27G2624' => 'fan', 'FAN27G3047' => 'fan', 'FAN28G2597' => 'fan', 'FvH4_1g02070' => 'fve', 'FvH4_1g02450' => 'fve', 'FvH4_2g01300' => 'fve', 'FvH4_2g28810' => 'fve', 'FvH4_2g38220' => 'fve', 'FvH4_3g30773' => 'fve', 'FvH4_5g30641' => 'fve', 'FvH4_6g16032' => 'fve', 'FvH4_7g12480' => 'fve', 'FvH4_7g19170' => 'fve', 'FvH4_7g19180' => 'fve', 'Glyma.03G020800' => 'gma', 'Glyma.04G065450' => 'gma', 'Glyma.04G165151' => 'gma', 'Glyma.06G003700' => 'gma', 'Glyma.06G066600' => 'gma', 'Glyma.07G082700' => 'gma', 'Glyma.07G155650' => 'gma', 'Glyma.09G266600' => 'gma', 'Glyma.10G210000' => 'gma', 'Glyma.11G107300' => 'gma', 'Glyma.12G032400' => 'gma', 'Glyma.14G124000' => 'gma', 'Glyma.14G220000' => 'gma', 'Glyma.17G109500' => 'gma', 'Glyma.17G259000' => 'gma', 'Glyma.18G224000' => 'gma', 'Glyma.20G180600' => 'gma', 'Gohir.A01G002900' => 'ghi', 'Gohir.A02G083000' => 'ghi', 'Gohir.A03G177500' => 'ghi', 'Gohir.A04G073550' => 'ghi', 'Gohir.A05G185400' => 'ghi', 'Gohir.A05G412200' => 'ghi', 'Gohir.A06G052900' => 'ghi', 'Gohir.A08G033300' => 'ghi', 'Gohir.A08G089100' => 'ghi', 'Gohir.A10G204800' => 'ghi', 'Gohir.A11G083000' => 'ghi', 'Gohir.A12G102500' => 'ghi', 'Gohir.A13G181100' => 'ghi', 'Gohir.D01G002500' => 'ghi', 'Gohir.D02G098400' => 'ghi', 'Gohir.D02G201200' => 'ghi', 'Gohir.D04G003800' => 'ghi', 'Gohir.D05G058300' => 'ghi', 'Gohir.D05G188200' => 'ghi', 'Gohir.D06G051900' => 'ghi', 'Gohir.D08G044000' => 'ghi', 'Gohir.D08G100300' => 'ghi', 'Gohir.D10G212800' => 'ghi', 'Gohir.D11G087100' => 'ghi', 'Gohir.D12G105700' => 'ghi', 'Gohir.D13G188900' => 'ghi', 'Gorai.002G003300' => 'gra', 'Gorai.002G191600' => 'gra', 'Gorai.004G042700' => 'gra', 'Gorai.004G108100' => 'gra', 'Gorai.005G112200' => 'gra', 'Gorai.005G225900' => 'gra', 'Gorai.007G093000' => 'gra', 'Gorai.008G115000' => 'gra', 'Gorai.008G236900' => 'gra', 'Gorai.009G059400' => 'gra', 'Gorai.009G193500' => 'gra', 'Gorai.009G321500' => 'gra', 'Gorai.010G060200' => 'gra', 'Gorai.011G238500' => 'gra', 'Gorai.012G005000' => 'gra', 'Gorai.013G086800' => 'gra', 'Gorai.013G214300' => 'gra', 'GSVIVG01009939001' => 'vvi', 'GSVIVG01009943001' => 'vvi', 'GSVIVG01012829001' => 'vvi', 'GSVIVG01016090001' => 'vvi', 'GSVIVG01016258001' => 'vvi', 'GSVIVG01021442001' => 'vvi', 'GSVIVG01024034001' => 'vvi', 'GSVIVG01025699001' => 'vvi', 'GSVIVG01027563001' => 'vvi', 'GSVIVG01029813001' => 'vvi', 'GSVIVG01035883001' => 'vvi', 'GSVIVG01037580001' => 'vvi', 'HanXRQChr01g0002681' => 'han', 'HanXRQChr02g0033191' => 'han', 'HanXRQChr03g0063151' => 'han', 'HanXRQChr03g0072581' => 'han', 'HanXRQChr05g0143521' => 'han', 'HanXRQChr05g0145281' => 'han', 'HanXRQChr08g0218811' => 'han', 'HanXRQChr09g0242411' => 'han', 'HanXRQChr12g0368731' => 'han', 'HanXRQChr13g0387181' => 'han', 'HanXRQChr13g0400151' => 'han', 'HanXRQChr13g0425551' => 'han', 'HanXRQChr15g0478761' => 'han', 'HanXRQChr15g0483401' => 'han', 'HanXRQChr16g0502701' => 'han', 'HanXRQChr16g0511651' => 'han', 'HanXRQChr16g0523451' => 'han', 'HanXRQChr17g0544231' => 'han', 'HanXRQChr17g0557101' => 'han', 'Haze_02150' => 'cav', 'Haze_16725' => 'cav', 'Haze_16877' => 'cav', 'Haze_20581' => 'cav', 'Haze_21493' => 'cav', 'Haze_22660' => 'cav', 'Haze_25408' => 'cav', 'Haze_25483' => 'cav', 'Hma1.2p1_0032F.1_g019440' => 'hma', 'Hma1.2p1_0163F.1_g072380' => 'hma', 'Hma1.2p1_0395F.1_g143620' => 'hma', 'Hma1.2p1_0532F.1_g173450' => 'hma', 'Hma1.2p1_0614F.1_g189400' => 'hma', 'Hma1.2p1_0733F.1_g210190' => 'hma', 'Hma1.2p1_1403F.1_g281190' => 'hma', 'Hma1.2p1_2383F.1_g321090' => 'hma', 'HPP92_002969' => 'vpl', 'HPP92_007314' => 'vpl', 'HPP92_007315' => 'vpl', 'HPP92_008608' => 'vpl', 'HPP92_014621' => 'vpl', 'HPP92_014622' => 'vpl', 'HPP92_022483' => 'vpl', 'HPP92_025910' => 'vpl', 'HPP92_025915' => 'vpl', 'Hund00026' => 'sun', 'Hund00821' => 'sun', 'Hund04497' => 'sun', 'Hund05176' => 'sun', 'Hund06430' => 'sun', 'Hund09296' => 'sun', 'Hund16978' => 'sun', 'Hund25881' => 'sun', 'Lalb_Chr01g0008601' => 'lal', 'Lalb_Chr01g0021251' => 'lal', 'Lalb_Chr02g0142251' => 'lal', 'Lalb_Chr03g0025141' => 'lal', 'Lalb_Chr06g0162421' => 'lal', 'Lalb_Chr07g0179331' => 'lal', 'Lalb_Chr07g0189551' => 'lal', 'Lalb_Chr11g0063661' => 'lal', 'Lalb_Chr13g0291631' => 'lal', 'Lalb_Chr13g0301441' => 'lal', 'Lalb_Chr19g0139151' => 'lal', 'Lalb_Chr21g0306141' => 'lal', 'Lalb_Chr23g0265031' => 'lal', 'Lj1g0003269' => 'lja', 'Lj1g0009871' => 'lja', 'Lj1g0022025' => 'lja', 'Lj2A113T37' => 'lonja', 'Lj2C16T8' => 'lonja', 'Lj3g0021724' => 'lja', 'Lj3g0026342' => 'lja', 'Lj4A21T60' => 'lonja', 'Lj4C799T2' => 'lonja', 'Lj4g0020589' => 'lja', 'Lj5A180G49' => 'lonja', 'Lj5g0001802' => 'lja', 'Lj5g0003811' => 'lja', 'Lj7C525G14' => 'lonja', 'Lj7C725T6' => 'lonja', 'Lj8A723T58' => 'lonja', 'Lj9C701G6' => 'lonja', 'Lsat_1_v5_gn_0_1300' => 'lsa', 'Lsat_1_v5_gn_0_17581' => 'lsa', 'Lsat_1_v5_gn_3_135441' => 'lsa', 'Lsat_1_v5_gn_3_46701' => 'lsa', 'Lsat_1_v5_gn_4_37541' => 'lsa', 'Lsat_1_v5_gn_5_54360' => 'lsa', 'Lsat_1_v5_gn_6_113460' => 'lsa', 'Lsat_1_v5_gn_6_30941' => 'lsa', 'Lsat_1_v5_gn_6_98941' => 'lsa', 'Lsat_1_v5_gn_7_44361' => 'lsa', 'Lsat_1_v5_gn_8_129541' => 'lsa', 'Lsat_1_v5_gn_8_20341' => 'lsa', 'Lsat_1_v5_gn_8_30100' => 'lsa', 'Lsat_1_v5_gn_8_61401' => 'lsa', 'Lsat_1_v5_gn_8_61421' => 'lsa', 'Manes.01G264400' => 'mes', 'Manes.03G013200' => 'mes', 'Manes.04G075000' => 'mes', 'Manes.05G043200' => 'mes', 'Manes.05G145400' => 'mes', 'Manes.07G098800' => 'mes', 'Manes.08G008100' => 'mes', 'Manes.10G047400' => 'mes', 'Manes.14G117400' => 'mes', 'Manes.16G124000' => 'mes', 'Mapoly0022s0057' => 'mpo', 'Mapoly0022s0060' => 'mpo', 'Mapoly0022s0062' => 'mpo', 'Mapoly0031s0096' => 'mpo', 'Mapoly0035s0038' => 'mpo', 'Mapoly0041s0076' => 'mpo', 'Mapoly0061s0016' => 'mpo', 'Mapoly0096s0009' => 'mpo', 'MBI07_g30984_MAGBIO' => 'mbi', 'MBI09_g40618_MAGBIO' => 'mbi', 'MCO04G481' => 'mco', 'MCO08G031' => 'mco', 'MCO09G073' => 'mco', 'MCO10G225' => 'mco', 'MCO13G525' => 'mco', 'MCO15G057' => 'mco', 'MCO16G532' => 'mco', 'MD00G1161000' => 'mdo', 'MD01G1107100' => 'mdo', 'MD01G1107200' => 'mdo', 'MD02G1021500' => 'mdo', 'MD02G1198800' => 'mdo', 'MD05G1120700' => 'mdo', 'MD07G1172800' => 'mdo', 'MD07G1173000' => 'mdo', 'MD08G1010600' => 'mdo', 'MD12G1117500' => 'mdo', 'MD15G1010700' => 'mdo', 'MD15G1128000' => 'mdo', 'MD15G1164400' => 'mdo', 'Medtr1g025550' => 'mtr', 'Medtr1g094810' => 'mtr', 'Medtr3g106660' => 'mtr', 'Medtr4g052080' => 'mtr', 'Medtr4g073400' => 'mtr', 'Medtr4g073510' => 'mtr', 'Medtr4g115660' => 'mtr', 'Medtr7g075790' => 'mtr', 'Medtr7g080570' => 'mtr', 'Medtr8g035590' => 'mtr', 'MELO3C003716.2' => 'cme', 'MELO3C004470.2' => 'cme', 'MELO3C011022.2' => 'cme', 'MELO3C013361.2' => 'cme', 'MELO3C019808.2' => 'cme', 'MELO3C020813.2' => 'cme', 'MELO3C022511.2' => 'cme', 'MELO3C031301.2' => 'cme', 'MELO3C032061.2' => 'cme', 'MELO3C034023.2' => 'cme', 'Migut.A00024' => 'egut', 'Migut.B00087' => 'egut', 'Migut.B01660' => 'egut', 'Migut.C00857' => 'egut', 'Migut.E00992' => 'egut', 'Migut.E01809' => 'egut', 'Migut.F01978' => 'egut', 'Migut.K00416' => 'egut', 'Migut.K00999' => 'egut', 'Migut.L01684' => 'egut', 'Migut.N01581' => 'egut', 'Migut.N01584' => 'egut', 'MSTRG.1179' => 'ama', 'MSTRG.20771' => 'ama', 'MSTRG.25261' => 'ama', 'MSTRG.26344' => 'ama', 'MSTRG.28196' => 'ama', 'MSTRG.5449' => 'ama', 'MSTRG.9167' => 'ama', 'Nitab4.5_0000071g0130' => 'nta', 'Nitab4.5_0000101g0240' => 'nta', 'Nitab4.5_0000192g0170' => 'nta', 'Nitab4.5_0000247g0090' => 'nta', 'Nitab4.5_0000386g0230' => 'nta', 'Nitab4.5_0001369g0020' => 'nta', 'Nitab4.5_0001702g0220' => 'nta', 'Nitab4.5_0001880g0060' => 'nta', 'Nitab4.5_0001944g0020' => 'nta', 'Nitab4.5_0002267g0040' => 'nta', 'Nitab4.5_0002329g0020' => 'nta', 'Nitab4.5_0002436g0060' => 'nta', 'Nitab4.5_0002659g0040' => 'nta', 'Nitab4.5_0004205g0040' => 'nta', 'Nitab4.5_0005340g0040' => 'nta', 'Nitab4.5_0005396g0050' => 'nta', 'Nitab4.5_0005817g0010' => 'nta', 'Nitab4.5_0006009g0010' => 'nta', 'Nitab4.5_0006507g0060' => 'nta', 'Nitab4.5_0008364g0040' => 'nta', 'Nitab4.5_0008885g0010' => 'nta', 'Nitab4.5_0009889g0020' => 'nta', 'Nitab4.5_0010110g0060' => 'nta', 'Nitab4.5_0010178g0040' => 'nta', 'Nitab4.5_0012973g0020' => 'nta', 'Nitab4.5_0013443g0010' => 'nta', 'Nitab4.5_0013925g0010' => 'nta', 'Nn1g01152' => 'nnu', 'Nn2g10838' => 'nnu', 'Nn2g13132' => 'nnu', 'Nn5g28563' => 'nnu', 'Nn5g30767' => 'nnu', 'Nn6g32003' => 'nnu', 'Nn6g34133' => 'nnu', 'Nn6g34345' => 'nnu', 'Oeu007362.3' => 'oeu', 'Oeu008326.1' => 'oeu', 'Oeu016967.2' => 'oeu', 'Oeu026238.1' => 'oeu', 'Oeu031337.1' => 'oeu', 'Oeu052748.2' => 'oeu', 'Oeu053107.1' => 'oeu', 'Oeu055664.1' => 'oeu', 'Oeu056961.1' => 'oeu', 'Oeu056962.1' => 'oeu', 'Oeu059208.1' => 'oeu', 'Os01g0819200' => 'osa', 'Os01g0819300' => 'osa', 'Os02g0448400' => 'osa', 'Os03g0251600' => 'osa', 'Os04g0644900' => 'osa', 'Os06g0685300' => 'osa', 'Os07g0409100' => 'osa', 'Os08g0300200' => 'osa', 'Os09g0538800' => 'osa', 'Peaxi162Scf00008g01717' => 'pax', 'Peaxi162Scf00064g00735' => 'pax', 'Peaxi162Scf00088g01029' => 'pax', 'Peaxi162Scf00123g00069' => 'pax', 'Peaxi162Scf00136g00176' => 'pax', 'Peaxi162Scf00362g00720' => 'pax', 'Peaxi162Scf00370g00005' => 'pax', 'Peaxi162Scf00988g00321' => 'pax', 'Peaxi162Scf01221g00043' => 'pax', 'Peaxi162Scf01286g00119' => 'pax', 'Peaxi162Scf02135g00019' => 'pax', 'PGR031G1596' => 'pgr', 'PGR031G3659' => 'pgr', 'PGR042G2092' => 'pgr', 'PGR042G3813' => 'pgr', 'PGR044G0515' => 'pgr', 'PGR142G0132' => 'pgr', 'PGR142G0769' => 'pgr', 'PGR142G2323' => 'pgr', 'PGR142G4005' => 'pgr', 'PGSC0003DMG400007914' => 'stu', 'PGSC0003DMG400010278' => 'stu', 'PGSC0003DMG400013676' => 'stu', 'PGSC0003DMG400013947' => 'stu', 'PGSC0003DMG400016098' => 'stu', 'PGSC0003DMG400021059' => 'stu', 'PGSC0003DMG400021563' => 'stu', 'PGSC0003DMG400026771' => 'stu', 'PGSC0003DMG400029335' => 'stu', 'PGSC0003DMG401006174' => 'stu', 'PGSC0003DMG401030679' => 'stu', 'PGSC0003DMG402018044' => 'stu', 'PGSC0003DMG402030679' => 'stu', 'Phvul.001G005500' => 'pvu', 'Phvul.003G170400' => 'pvu', 'Phvul.007G096000' => 'pvu', 'Phvul.008G074100' => 'pvu', 'Phvul.009G091600' => 'pvu', 'Phvul.009G119800' => 'pvu', 'Phvul.010G086200' => 'pvu', 'Phvul.011G035100' => 'pvu', 'Potri.002G019800' => 'ptr', 'Potri.002G150700' => 'ptr', 'Potri.004G174600' => 'ptr', 'Potri.005G241700' => 'ptr', 'Potri.006G063900' => 'ptr', 'Potri.008G038300' => 'ptr', 'Potri.009G134200' => 'ptr', 'Potri.010G223900' => 'ptr', 'Potri.014G072800' => 'ptr', 'Potri.018G025000' => 'ptr', 'Potri.018G124000' => 'ptr', 'Pp3c20_15790' => 'ppa', 'Pp3c20_8650' => 'ppa', 'Pp3c23_14990' => 'ppa', 'Pp3c24_10990' => 'ppa', 'Pp3c24_11150' => 'ppa', 'Pp3c24_11156' => 'ppa', 'Pp3c27_6710' => 'ppa', 'Pp3c4_12090' => 'ppa', 'Pp3c4_12100' => 'ppa', 'Pp3c4_12110' => 'ppa', 'Pp3c8_11720' => 'ppa', 'Pp3c8_2192' => 'ppa', 'PRCOL_00003719' => 'pco', 'PRCOL_00003972' => 'pco', 'PRCOL_00005908' => 'pco', 'PRCOL_00006146' => 'pco', 'Prupe.1G363200' => 'ppe', 'Prupe.1G483300' => 'ppe', 'Prupe.2G149400' => 'ppe', 'Prupe.2G211900' => 'ppe', 'Prupe.2G212000' => 'ppe', 'Prupe.6G235800' => 'ppe', 'Prupe.7G250200' => 'ppe', 'Prupe.8G164600' => 'ppe', 'Psat0s2115g0040' => 'psa', 'Psat0ss4236g0200' => 'psa', 'Psat4g036200' => 'psa', 'Psat4g150200' => 'psa', 'Psat5g002320' => 'psa', 'Psat5g029800' => 'psa', 'Psat5g178280' => 'psa', 'Psat6g003240' => 'psa', 'Psat6g181920' => 'psa', 'PSO017G1224' => 'pso', 'PSO063G5345' => 'pso', 'PSO170G0323' => 'pso', 'PSO170G6232' => 'pso', 'PSO210G3884' => 'pso', 'PSO293G0002' => 'pso', 'PSO339G1003' => 'pso', 'PSO478G1135' => 'pso', 'PSO675G8975' => 'pso', 'PSO782G3898' => 'pso', 'PSO782G4406' => 'pso', 'PSO782G5300' => 'pso', 'PSO807G0001' => 'pso', 'QL02p012108' => 'qlo', 'QL02p021167' => 'qlo', 'QL02p090217' => 'qlo', 'QL07p044256' => 'qlo', 'QL08p051581' => 'qlo', 'QL08p055433' => 'qlo', 'QL11p050038' => 'qlo', 'QL11p050122' => 'qlo', 'QL93p2024_0070' => 'qlo', 'RcHm_v2.0_Chr1g0351321' => 'rch', 'RcHm_v2.0_Chr1g0363021' => 'rch', 'RcHm_v2.0_Chr1g0363031' => 'rch', 'RcHm_v2.0_Chr2g0087411' => 'rch', 'RcHm_v2.0_Chr3g0469781' => 'rch', 'RcHm_v2.0_Chr6g0252191' => 'rch', 'RcHm_v2.0_Chr6g0297561' => 'rch', 'RcHm_v2.0_Chr6g0303161' => 'rch', 'RcHm_v2.0_Chr7g0191281' => 'rch', 'Rhsim01G0060000' => 'rsi', 'Rhsim01G0160900' => 'rsi', 'Rhsim02G0203200' => 'rsi', 'Rhsim05G0060700' => 'rsi', 'Rhsim07G0250500' => 'rsi', 'Rhsim09G0150900' => 'rsi', 'Rhsim09G0151000' => 'rsi', 'Sabra02G0016100' => 'sbr', 'Sabra02G0119100' => 'sbr', 'Sabra05G0187100' => 'sbr', 'Sabra08G0026000' => 'sbr', 'Sabra09G0103900' => 'sbr', 'Sabra10G0173300' => 'sbr', 'Sabra14G0052000' => 'sbr', 'Sabra18G0027600' => 'sbr', 'Sabra18G0105800' => 'sbr', 'SalBow1G3347' => 'sbo', 'SalBow1G6714' => 'sbo', 'SalBow4G0565' => 'sbo', 'SalBow4G2229' => 'sbo', 'SalBow5G0959' => 'sbo', 'SalBow5G2307' => 'sbo', 'SalBow5G3914' => 'sbo', 'SalBow5G4380' => 'sbo', 'SalBow7G2428' => 'sbo', 'SalBow7G3143' => 'sbo', 'SalBow8G5276' => 'sbo', 'Sc02g0002390' => 'sci', 'Sc06g0000570' => 'sci', 'Sc08g0006220' => 'sci', 'Sc18g0006470' => 'sci', 'Sc20g0001610' => 'sci', 'Sed0000274' => 'sed', 'Sed0001294' => 'sed', 'Sed0005331' => 'sed', 'Sed0006487' => 'sed', 'Sed0009299' => 'sed', 'Sed0012380' => 'sed', 'Sed0013140' => 'sed', 'Sed0013339' => 'sed', 'Sed0014593' => 'sed', 'Sed0015675' => 'sed', 'Sed0019006' => 'sed', 'SEGI_00828' => 'sgi', 'SEGI_11100' => 'sgi', 'SEGI_15811' => 'sgi', 'SEGI_24655' => 'sgi', 'SEGI_25809' => 'sgi', 'SEGI_30480' => 'sgi', 'SEGI_33288' => 'sgi', 'SEGI_33636' => 'sgi', 'SEGI_40913' => 'sgi', 'SGA_v2.0_scaffold153G37045' => 'sas', 'SGA_v2.0_scaffold163G37963' => 'sas', 'SGA_v2.0_scaffold183G39906' => 'sas', 'SGA_v2.0_scaffold19G08550' => 'sas', 'SGA_v2.0_scaffold272G46347' => 'sas', 'SGA_v2.0_scaffold33G13433' => 'sas', 'SGA_v2.0_scaffold33G13437' => 'sas', 'SGA_v2.0_scaffold43G16462' => 'sas', 'SGA_v2.0_scaffold452G51824' => 'sas', 'SGA_v2.0_scaffold58G20377' => 'sas', 'SGA_v2.0_scaffold62G21405' => 'sas', 'SGA_v2.0_scaffold64G21956' => 'sas', 'SGA_v2.0_scaffold927G53732' => 'sas', 'SGA_v2.0_scaffold92G28208' => 'sas', 'SGA_v2.0_scaffold95G28885' => 'sas', 'SHI05727' => 'shi', 'SHI13498' => 'shi', 'SHI18535' => 'shi', 'SHI49778' => 'shi', 'SMO143G0196' => 'smo', 'SMO143G0326' => 'smo', 'SMO353G0268' => 'smo', 'SMO353G0399' => 'smo', 'SMO356G0166' => 'smo', 'SMO364G0568' => 'smo', 'SMO364G0926' => 'smo', 'SMO367G0486' => 'smo', 'Solyc01g014090.1' => 'sly', 'Solyc01g014370.2' => 'sly', 'Solyc01g094030.3' => 'sly', 'Solyc01g111520.3' => 'sly', 'Solyc05g047710.3' => 'sly', 'Solyc07g007680.4' => 'sly', 'Solyc08g021930.2' => 'sly', 'Solyc09g007860.4' => 'sly', 'Solyc10g017590.3' => 'sly', 'Solyc10g052520.2' => 'sly', 'Solyc12g009695.1' => 'sly', 'Solyc12g009710.1' => 'sly', 'Solyc12g009760.1' => 'sly', 'Solyc12g009790.2' => 'sly', 'Solyc12g089330.2' => 'sly', 'Sopen01g009060' => 'spe', 'Sopen01g037850' => 'spe', 'Sopen01g053560' => 'spe', 'Sopen05g027960' => 'spe', 'Sopen07g003670' => 'spe', 'Sopen08g011720' => 'spe', 'Sopen09g002700' => 'spe', 'Sopen10g006510' => 'spe', 'Sopen10g023280' => 'spe', 'Sopen12g004660' => 'spe', 'Sopen12g004680' => 'spe', 'Sopen12g031190' => 'spe', 'Sp1g04370' => 'spa', 'Sp1g17850' => 'spa', 'Sp4g00180' => 'spa', 'Sp5g02310' => 'spa', 'Sp6g32400' => 'spa', 'Sp6g38520' => 'spa', 'Sp6g38530' => 'spa', 'TAR374G0207' => 'tar', 'TAR375G0596' => 'tar', 'TAR375G1125' => 'tar', 'TAR376G0832' => 'tar', 'TAR383G1072' => 'tar', 'TAR625G1515' => 'tar', 'TAR628G0892' => 'tar', 'TAR633G0533' => 'tar', 'TAR636G2816' => 'tar', 'THA.LOC104802000' => 'tha', 'THA.LOC104808958' => 'tha', 'THA.LOC104809535' => 'tha', 'THA.LOC104811425' => 'tha', 'THA.LOC104816417' => 'tha', 'THA.LOC104824614' => 'tha', 'THA.LOC104824767' => 'tha', 'THA.LOC104827619' => 'tha', 'Thecc.01G372800' => 'tca', 'Thecc.02G061200' => 'tca', 'Thecc.05G061800' => 'tca', 'Thecc.08G046700' => 'tca', 'Thecc.08G047000' => 'tca', 'Thecc.09G021900' => 'tca', 'Thecc.09G134800' => 'tca', 'Thecc.10G076200' => 'tca', 'Thhalv10000116m.g' => 'esa', 'Thhalv10005905m.g' => 'esa', 'Thhalv10007226m.g' => 'esa', 'Thhalv10007306m.g' => 'esa', 'Thhalv10013100m.g' => 'esa', 'Thhalv10013165m.g' => 'esa', 'TPR.G1971' => 'tpr', 'TPR.G26382' => 'tpr', 'TPR.G30884' => 'tpr', 'TPR.G3155' => 'tpr', 'TPR.G37853' => 'tpr', 'TPR.G38472' => 'tpr', 'TPR.G39208' => 'tpr', 'TPR.G7286' => 'tpr', 'TPR.G7621' => 'tpr', 'TWI15G0417' => 'twi', 'TWI23G0338' => 'twi', 'TWI31G0242' => 'twi', 'TWI34G0057' => 'twi', 'TWI53G0647' => 'twi', 'TWI56G0143' => 'twi', 'TWI59G1172' => 'twi', 'TWI63G0359' => 'twi', 'TWI63G1561' => 'twi', 'TWI79G0627' => 'twi', 'unitig_0.g2086' => 'ugi', 'unitig_0.g819' => 'ugi', 'unitig_0.g822' => 'ugi', 'unitig_26.g9315' => 'ugi', 'unitig_26.g9316' => 'ugi', 'unitig_32.g11511' => 'ugi', 'unitig_578.g16387' => 'ugi', 'unitig_747.g21530' => 'ugi', 'unitig_749.g14364' => 'ugi', 'unitig_8.g3390' => 'ugi', 'unitig_8.g3391' => 'ugi', 'unitig_899.g15458' => 'ugi', 'vmacro04367' => 'vma', 'vmacro04864' => 'vma', 'vmacro07735' => 'vma', 'vmacro11188' => 'vma', 'vmacro17355' => 'vma', 'vmacro20992' => 'vma', 'VMungo0331G0034' => 'vmu', 'VMungo0647G0879' => 'vmu', 'VMungo0720G1518' => 'vmu', 'VMungo1127G0105' => 'vmu', 'VMungo1215G2429' => 'vmu', 'VMungo1309G0404' => 'vmu', 'VMungo1309G3143' => 'vmu', 'VMungo1383G0814' => 'vmu', 'VMungo1383G1999' => 'vmu', 'Zm00001eb010800' => 'zma', 'Zm00001eb025070' => 'zma', 'Zm00001eb068630' => 'zma', 'Zm00001eb103760' => 'zma', 'Zm00001eb110300' => 'zma', 'Zm00001eb225520' => 'zma', 'Zm00001eb305750' => 'zma', 'Zm00001eb332000' => 'zma' ) $gf_id = 'HOM05D000524' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000524' ) $data_identifier = 'HOM05D000524' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 20, 'aar' => (int) 11, 'aag' => (int) 3, 'ach' => (int) 18, 'amhyb' => (int) 7, 'aly' => (int) 6, 'aox' => (int) 6, 'arhy' => (int) 19, 'ath' => (int) 9, 'atr' => (int) 4, 'acertr' => (int) 8, 'cqu' => (int) 14, 'bca' => (int) 20, 'bol' => (int) 10, 'bra' => (int) 9, 'can' => (int) 9, 'cansat' => (int) 9, 'chi' => (int) 10, 'cru' => (int) 6, 'car' => (int) 7, 'cbr' => (int) 5, 'ccan' => (int) 7, 'cde' => (int) 8, 'cfa' => (int) 7, 'ccl' => (int) 7, 'cil' => (int) 14, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 6, 'cre' => (int) 5, 'csa' => (int) 8, 'camsi' => (int) 30, 'dca' => (int) 13, 'din' => (int) 11, 'dzi' => (int) 12, 'eca' => (int) 12, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 31, 'fve' => (int) 11, 'gma' => (int) 17, 'ghi' => (int) 26, 'gra' => (int) 17, 'vvi' => (int) 12, 'han' => (int) 19, 'cav' => (int) 8, 'hma' => (int) 8, 'vpl' => (int) 9, 'sun' => (int) 8, 'lal' => (int) 13, 'lja' => (int) 8, 'lonja' => (int) 9, 'lsa' => (int) 15, 'mes' => (int) 10, 'mpo' => (int) 8, 'mbi' => (int) 2, 'mco' => (int) 7, 'mdo' => (int) 13, 'mtr' => (int) 10, 'cme' => (int) 10, 'egut' => (int) 12, 'ama' => (int) 7, 'nta' => (int) 27, 'nnu' => (int) 8, 'oeu' => (int) 11, 'osa' => (int) 9, 'pax' => (int) 11, 'pgr' => (int) 9, 'stu' => (int) 13, 'pvu' => (int) 8, 'ptr' => (int) 11, 'ppa' => (int) 12, 'pco' => (int) 4, 'ppe' => (int) 8, 'psa' => (int) 9, 'pso' => (int) 13, 'qlo' => (int) 9, 'rch' => (int) 9, 'rsi' => (int) 7, 'sbr' => (int) 9, 'sbo' => (int) 11, 'sci' => (int) 5, 'sed' => (int) 11, 'sgi' => (int) 9, 'sas' => (int) 15, 'shi' => (int) 4, 'smo' => (int) 8, 'sly' => (int) 15, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 9, 'tha' => (int) 8, 'tca' => (int) 8, 'esa' => (int) 6, 'tpr' => (int) 9, 'twi' => (int) 10, 'ugi' => (int) 12, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 8 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb332000' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1